Human SNP ID | rs5910578 |
---|---|
Human chromosome | chrX |
Human SNP position | 119433739 |
Pig chromosome | chrX |
Pig SNP position | 113765376 |
PubMed ID | 21623375 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21623375 |
Study | Genome-wide association identifies three new susceptibility loci for Paget__s disease of bone. |
Disease/Trait | Paget__s disease |
Initial sample | 741 European ancestry cases, 2,699 European ancestry controls |
Replication sample | 1,474 European ancestry cases, 1,671 European ancestry controls |
Region | Xq24 |
Chromosome id | chrX |
Chromosome position | 119433739 |
Reported gene | SLC25A43 |
Mapped gene | SLC25A43 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 203427 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5910578-C |
SNPs | rs5910578 |
Merged | 0 |
SNP id current | 5910578 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.74 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 1.34 |
%95 Ci | [NR] |
Platform | Illumina [2487078] (imputed) |
CNV | N |
Mapped trait | osteitis deformans |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004261 |
Study accession | GCST001086 |