Human SNP ID | rs590856 |
---|---|
Human chromosome | chr6 |
Human SNP position | 139523292 |
Pig chromosome | chr1 |
Pig SNP position | 28162367 |
PubMed ID | 23222517 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23222517 |
Study | Seventy-five genetic loci influencing the human red blood cell. |
Disease/Trait | Red blood cell traits |
Initial sample | 62,553 European ancestry individuals, 9,308 South Asian ancestry individuals |
Replication sample | 63,506 European ancestry individuals |
Region | 6q24.1 |
Chromosome id | chr6 |
Chromosome position | 139523292 |
Reported gene | CITED2, LOC645434 |
Mapped gene | LOC645434 - LOC105378023 |
Upstream gene id | 645434 |
Downstream gene id | 105378023 |
SNP gene ids | |
Upstream gene distance | 48696 |
Downstream gene distance | 2212 |
SNP risk allele | rs590856-G |
SNPs | rs590856 |
Merged | 0 |
SNP id current | 590856 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.43 |
P value | 5E-36 |
Pvalue mlog | 35.3010299956639 |
P value text | (EA, MCV) |
Or beta | 0.313 |
%95 Ci | [0.26-0.36] unit increase |
Platform | Affymetrix, Illumina, Perlegen [2711806] (imputed) |
CNV | N |
Mapped trait | mean corpuscular volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004526 |
Study accession | GCST001765 |