SNP Detail For rs59072263
1.Mapping Information
Human SNP ID rs59072263
Human chromosome chr7
Human SNP position 8112437
Pig chromosome chr9
Pig SNP position 85967698
2.Annotation Information
PubMed ID23836780
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23836780
StudyGenome-wide association study of intraocular pressure identifies the GLCCI1/ICA1 region as a glaucoma susceptibility locus.
Disease/TraitIntraocular pressure
Initial sample2,175 European ancestry individuals
Replication sample4,866 European ancestry individuals
Region7p21.3
Chromosome idchr7
Chromosome position8112437
Reported geneGLCCI1, ICA1
Mapped geneLOC105375142 - ICA1
Upstream gene id105375142
Downstream gene id3382
SNP gene ids
Upstream gene distance16756
Downstream gene distance747
SNP risk allelers59072263-G
SNPsrs59072263
Merged0
SNP id current59072263
Contextupstream_gene_variant
Intergenic1
Allele frequency0.88
P value0.00000001
Pvalue mlog8
P value text
Or beta0.45
%95 Ci[0.29-0.61] unit increase
PlatformIllumina [6235970]
CNVN
Mapped traitintraocular pressure measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004695
Study accessionGCST002089