SNP Detail For rs58873874
1.Mapping Information
Human SNP ID rs58873874
Human chromosome chr5
Human SNP position 157518140
Pig chromosome chr16
Pig SNP position 71619755
2.Annotation Information
PubMed ID24322204
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24322204
StudyGenome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Disease/TraitBipolar disorder (body mass index interaction)
Initial sample388 European ancestry cases, 1,020 European ancestry controls
Replication sampleNA
Region5q33.3
Chromosome idchr5
Chromosome position157518140
Reported geneNR
Mapped geneADAM19
Upstream gene id
Downstream gene id
SNP gene ids8728
Upstream gene distance
Downstream gene distance
SNP risk allelers58873874-?
SNPsrs58873874
Merged0
SNP id current58873874
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformNR [up to 8466825] (imputed)
CNVN
Mapped traitbipolar disorder, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002306