SNP Detail For rs586688
1.Mapping Information
Human SNP ID rs586688
Human chromosome chr1
Human SNP position 201661827
Pig chromosome chr10
Pig SNP position 28347433
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1q32.1
Chromosome idchr1
Chromosome position201661827
Reported geneNAV1
Mapped geneNAV1
Upstream gene id
Downstream gene id
SNP gene ids89796
Upstream gene distance
Downstream gene distance
SNP risk allelers586688-A
SNPsrs586688
Merged0
SNP id current586688
Contextintron_variant
Intergenic0
Allele frequency0.092
P value0.000008
Pvalue mlog5.09691001300805
P value text(Estradiol )
Or beta0.03
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitestradiol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004697
Study accessionGCST001762