Human SNP ID | rs58603829 |
---|---|
Human chromosome | chr11 |
Human SNP position | 117980337 |
Pig chromosome | chr9 |
Pig SNP position | 50361811 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 11q23.3 |
Chromosome id | chr11 |
Chromosome position | 117980337 |
Reported gene | IL10RA |
Mapped gene | TMPRSS13 - IL10RA |
Upstream gene id | 84000 |
Downstream gene id | 3587 |
SNP gene ids | |
Upstream gene distance | 50884 |
Downstream gene distance | 6054 |
SNP risk allele | rs58603829-A |
SNPs | rs58603829 |
Merged | 0 |
SNP id current | 58603829 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.028 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Folate ) |
Or beta | 0.03 |
%95 Ci | [NR] nmol/L increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | folic acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005111 |
Study accession | GCST001762 |