SNP Detail For rs58423913
1.Mapping Information
Human SNP ID rs58423913
Human chromosome chr16
Human SNP position 78896840
Pig chromosome chr6
Pig SNP position 9245135
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region16q23.1
Chromosome idchr16
Chromosome position78896840
Reported geneWWOX
Mapped geneWWOX
Upstream gene id
Downstream gene id
SNP gene ids51741
Upstream gene distance
Downstream gene distance
SNP risk allelers58423913-C
SNPsrs58423913
Merged0
SNP id current58423913
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.957
P value0.000004
Pvalue mlog5.39794000867203
P value text(AA)
Or beta0.038
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264