Human SNP ID | rs577969 |
---|---|
Human chromosome | chr10 |
Human SNP position | 98531419 |
Pig chromosome | chr14 |
Pig SNP position | 119184019 |
PubMed ID | 23793025 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23793025 |
Study | Genome-wide meta-analysis identifies new susceptibility loci for migraine. |
Disease/Trait | Migraine |
Initial sample | 23,285 European ancestry cases, 95,425 European ancestry controls |
Replication sample | NA |
Region | 10q24.2 |
Chromosome id | chr10 |
Chromosome position | 98531419 |
Reported gene | intergenic |
Mapped gene | HPSE2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 60495 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs577969-T |
SNPs | rs577969 |
Merged | 0 |
SNP id current | 577969 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.05 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.13 |
%95 Ci | [1.07-1.19] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST002081 |