Human SNP ID | rs576523 |
---|---|
Human chromosome | chr1 |
Human SNP position | 160776286 |
Pig chromosome | chr4 |
Pig SNP position | 97499568 |
PubMed ID | 22864933 |
---|---|
Journal | Cancer |
Link | www.ncbi.nlm.nih.gov/pubmed/22864933 |
Study | Identification of novel germline polymorphisms governing capecitabine sensitivity. |
Disease/Trait | Capecitabine sensitivity |
Initial sample | Up to 84 East Asian ancestry lymphoblastoid cell lines, up to 164 European ancestry lymphoblastoid cell lines, up to 173 African ancestry lymphoblastoid cell lines, up to 82 African American lymphoblastoid cell lines |
Replication sample | NA |
Region | 1q23.3 |
Chromosome id | chr1 |
Chromosome position | 160776286 |
Reported gene | intergenic |
Mapped gene | LOC105371470 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105371470 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs576523-? |
SNPs | rs576523 |
Merged | 0 |
SNP id current | 576523 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | NR [~ 2000000] |
CNV | N |
Mapped trait | response to antineoplastic agent |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0097327 |
Study accession | GCST001368 |