Human SNP ID | rs5763911 |
---|---|
Human chromosome | chr22 |
Human SNP position | 20443002 |
Pig chromosome | chr14 |
Pig SNP position | 54369237 |
PubMed ID | 23393555 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23393555 |
Study | Genome-wide association study of retinopathy in individuals without diabetes. |
Disease/Trait | Retinopathy in non-diabetics |
Initial sample | 19,411 European ancestry individuals |
Replication sample | NA |
Region | 22q11.21 |
Chromosome id | chr22 |
Chromosome position | 20443002 |
Reported gene | KLHL22 |
Mapped gene | KLHL22 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84861 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5763911-T |
SNPs | rs5763911 |
Merged | 0 |
SNP id current | 5763911 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.96 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.52 |
%95 Ci | [0.3-0.74] unit decrease |
Platform | Illumina [2675979] (imputed) |
CNV | N |
Mapped trait | retinopathy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003839 |
Study accession | GCST001854 |