SNP Detail For rs5763911
1.Mapping Information
Human SNP ID rs5763911
Human chromosome chr22
Human SNP position 20443002
Pig chromosome chr14
Pig SNP position 54369237
2.Annotation Information
PubMed ID23393555
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23393555
StudyGenome-wide association study of retinopathy in individuals without diabetes.
Disease/TraitRetinopathy in non-diabetics
Initial sample19,411 European ancestry individuals
Replication sampleNA
Region22q11.21
Chromosome idchr22
Chromosome position20443002
Reported geneKLHL22
Mapped geneKLHL22
Upstream gene id
Downstream gene id
SNP gene ids84861
Upstream gene distance
Downstream gene distance
SNP risk allelers5763911-T
SNPsrs5763911
Merged0
SNP id current5763911
Contextintron_variant
Intergenic0
Allele frequency0.96
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.52
%95 Ci[0.3-0.74] unit decrease
PlatformIllumina [2675979] (imputed)
CNVN
Mapped traitretinopathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003839
Study accessionGCST001854