Human SNP ID | rs5762430 |
---|---|
Human chromosome | chr22 |
Human SNP position | 27982484 |
Pig chromosome | chr14 |
Pig SNP position | 48215188 |
PubMed ID | 21552555 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/21552555 |
Study | A genome-wide association study on obesity and obesity-related traits. |
Disease/Trait | Obesity |
Initial sample | 520 European ancestry cases, 540 European ancestry controls |
Replication sample | 1,196 European ancestry individuals |
Region | 22q12.1 |
Chromosome id | chr22 |
Chromosome position | 27982484 |
Reported gene | PITPNB |
Mapped gene | TTC28, TTC28-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 23331, 284900 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5762430-? |
SNPs | rs5762430 |
Merged | 0 |
SNP id current | 5762430 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | (HIP) |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 550000] |
CNV | N |
Mapped trait | obesity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001073 |
Study accession | GCST001057 |