SNP Detail For rs5756506
1.Mapping Information
Human SNP ID rs5756506
Human chromosome chr22
Human SNP position 37071352
Pig chromosome chr5
Pig SNP position 8298338
2.Annotation Information
PubMed ID19820697
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19820697
StudyA genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
Disease/TraitHematological parameters
Initial sample4,627 European ancestry individuals
Replication sample9,316 European ancestry individuals
Region22q12.3
Chromosome idchr22
Chromosome position37071352
Reported geneTMPRSS6
Mapped geneTMPRSS6
Upstream gene id
Downstream gene id
SNP gene ids164656
Upstream gene distance
Downstream gene distance
SNP risk allelers5756506-C
SNPsrs5756506
Merged0
SNP id current5756506
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000000001
Pvalue mlog9
P value text(MCH)
Or beta0.14
%95 Ci[0.10-0.18] pg increase
PlatformAffymetrix, Illumina [~ 2110000] (imputed)
CNVN
Mapped traitmean corpuscular hemoglobin
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004527
Study accessionGCST000498