Human SNP ID | rs5756504 |
---|---|
Human chromosome | chr22 |
Human SNP position | 37071230 |
Pig chromosome | chr5 |
Pig SNP position | 8298448 |
PubMed ID | 20139978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20139978 |
Study | Genome-wide association study of hematological and biochemical traits in a Japanese population. |
Disease/Trait | Hematological and biochemical traits |
Initial sample | Up to 14,402 Japanese individuals |
Replication sample | NA |
Region | 22q12.3 |
Chromosome id | chr22 |
Chromosome position | 37071230 |
Reported gene | TMPRSS6 |
Mapped gene | TMPRSS6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 164656 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5756504-T |
SNPs | rs5756504 |
Merged | 0 |
SNP id current | 5756504 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | (Hb) |
Or beta | 0.076 |
%95 Ci | [0.052-0.1] unit increase |
Platform | Illumina [561583] |
CNV | N |
Mapped trait | hemoglobin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004509 |
Study accession | GCST000583 |