SNP Detail For rs5751902
1.Mapping Information
Human SNP ID rs5751902
Human chromosome chr22
Human SNP position 24600663
Pig chromosome chr14
Pig SNP position 53062100
2.Annotation Information
PubMed ID20139978
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20139978
StudyGenome-wide association study of hematological and biochemical traits in a Japanese population.
Disease/TraitHematological and biochemical traits
Initial sampleUp to 14,402 Japanese individuals
Replication sampleNA
Region22q11.23
Chromosome idchr22
Chromosome position24600663
Reported geneGGT1
Mapped geneGGT1
Upstream gene id
Downstream gene id
SNP gene ids2678
Upstream gene distance
Downstream gene distance
SNP risk allelers5751902-T
SNPsrs5751902
Merged0
SNP id current5751902
Contextintron_variant
Intergenic0
Allele frequency0.37
P value8E-20
Pvalue mlog19.096910013008
P value text(GGT)
Or beta0.172
%95 Ci[0.13-0.21] unit decrease
PlatformIllumina [561583]
CNVN
Mapped traitserum gamma-glutamyl transferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004532
Study accessionGCST000583