Human SNP ID | rs5751902 |
---|---|
Human chromosome | chr22 |
Human SNP position | 24600663 |
Pig chromosome | chr14 |
Pig SNP position | 53062100 |
PubMed ID | 20139978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20139978 |
Study | Genome-wide association study of hematological and biochemical traits in a Japanese population. |
Disease/Trait | Hematological and biochemical traits |
Initial sample | Up to 14,402 Japanese individuals |
Replication sample | NA |
Region | 22q11.23 |
Chromosome id | chr22 |
Chromosome position | 24600663 |
Reported gene | GGT1 |
Mapped gene | GGT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2678 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5751902-T |
SNPs | rs5751902 |
Merged | 0 |
SNP id current | 5751902 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.37 |
P value | 8E-20 |
Pvalue mlog | 19.096910013008 |
P value text | (GGT) |
Or beta | 0.172 |
%95 Ci | [0.13-0.21] unit decrease |
Platform | Illumina [561583] |
CNV | N |
Mapped trait | serum gamma-glutamyl transferase measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004532 |
Study accession | GCST000583 |