SNP Detail For rs5749446
1.Mapping Information
Human SNP ID rs5749446
Human chromosome chr22
Human SNP position 32484598
Pig chromosome chr5
Pig SNP position 12300653
2.Annotation Information
PubMed ID23222517
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/23222517
StudySeventy-five genetic loci influencing the human red blood cell.
Disease/TraitRed blood cell traits
Initial sample62,553 European ancestry individuals, 9,308 South Asian ancestry individuals
Replication sample63,506 European ancestry individuals
Region22q12.3
Chromosome idchr22
Chromosome position32484598
Reported geneFBXO7
Mapped geneFBXO7
Upstream gene id
Downstream gene id
SNP gene ids25793
Upstream gene distance
Downstream gene distance
SNP risk allelers5749446-T
SNPsrs5749446
Merged0
SNP id current5749446
Contextintron_variant
Intergenic0
Allele frequency0.62
P value0.0000000000003
Pvalue mlog12.5228787452803
P value text(EA, MCH)
Or beta0.007
%95 Ci[-0.00084-0.01484] unit increase
PlatformAffymetrix, Illumina, Perlegen [2711806] (imputed)
CNVN
Mapped traitmean corpuscular hemoglobin
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004527
Study accessionGCST001765