Human SNP ID | rs5749446 |
---|---|
Human chromosome | chr22 |
Human SNP position | 32484598 |
Pig chromosome | chr5 |
Pig SNP position | 12300653 |
PubMed ID | 23222517 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23222517 |
Study | Seventy-five genetic loci influencing the human red blood cell. |
Disease/Trait | Red blood cell traits |
Initial sample | 62,553 European ancestry individuals, 9,308 South Asian ancestry individuals |
Replication sample | 63,506 European ancestry individuals |
Region | 22q12.3 |
Chromosome id | chr22 |
Chromosome position | 32484598 |
Reported gene | FBXO7 |
Mapped gene | FBXO7 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 25793 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5749446-T |
SNPs | rs5749446 |
Merged | 0 |
SNP id current | 5749446 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.62 |
P value | 0.0000000000003 |
Pvalue mlog | 12.5228787452803 |
P value text | (EA, MCH) |
Or beta | 0.007 |
%95 Ci | [-0.00084-0.01484] unit increase |
Platform | Affymetrix, Illumina, Perlegen [2711806] (imputed) |
CNV | N |
Mapped trait | mean corpuscular hemoglobin |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004527 |
Study accession | GCST001765 |