Human SNP ID | rs5745687 |
---|---|
Human chromosome | chr7 |
Human SNP position | 81729735 |
Pig chromosome | chr9 |
Pig SNP position | 108809349 |
PubMed ID | 25552591 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25552591 |
Study | Genome-Wide Association Study for Endothelial Growth Factors. |
Disease/Trait | Endothelial growth factor levels |
Initial sample | up to 3,574 European ancestry individuals |
Replication sample | up to 3,184 European ancestry individuals |
Region | 7q21.11 |
Chromosome id | chr7 |
Chromosome position | 81729735 |
Reported gene | HGF |
Mapped gene | HGF |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3082 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs5745687-T |
SNPs | rs5745687 |
Merged | 0 |
SNP id current | 5745687 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.077 |
P value | 4E-19 |
Pvalue mlog | 18.397940008672 |
P value text | (HGF) |
Or beta | 0.099 |
%95 Ci | [0.077-0.121] unit decrease |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | endothelial growth factor measurement, hepatocyte growth factor measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006900, http://www.ebi.ac.uk/efo/EFO_0006903 |
Study accession | GCST002731 |