SNP Detail For rs5745687
1.Mapping Information
Human SNP ID rs5745687
Human chromosome chr7
Human SNP position 81729735
Pig chromosome chr9
Pig SNP position 108809349
2.Annotation Information
PubMed ID25552591
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25552591
StudyGenome-Wide Association Study for Endothelial Growth Factors.
Disease/TraitEndothelial growth factor levels
Initial sampleup to 3,574 European ancestry individuals
Replication sampleup to 3,184 European ancestry individuals
Region7q21.11
Chromosome idchr7
Chromosome position81729735
Reported geneHGF
Mapped geneHGF
Upstream gene id
Downstream gene id
SNP gene ids3082
Upstream gene distance
Downstream gene distance
SNP risk allelers5745687-T
SNPsrs5745687
Merged0
SNP id current5745687
Contextmissense_variant
Intergenic0
Allele frequency0.077
P value4E-19
Pvalue mlog18.397940008672
P value text(HGF)
Or beta0.099
%95 Ci[0.077-0.121] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitendothelial growth factor measurement, hepatocyte growth factor measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006900, http://www.ebi.ac.uk/efo/EFO_0006903
Study accessionGCST002731