Human SNP ID | rs574367 |
---|---|
Human chromosome | chr1 |
Human SNP position | 177904075 |
Pig chromosome | chr9 |
Pig SNP position | 131308765 |
PubMed ID | 24861553 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24861553 |
Study | Meta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index. |
Disease/Trait | Body mass index |
Initial sample | 82,438 East Asian ancestry individuals, 4,301 South East Asian ancestry individuals |
Replication sample | Up to 47,352 East Asian ancestry individuals |
Region | 1q25.2 |
Chromosome id | chr1 |
Chromosome position | 177904075 |
Reported gene | SEC16B |
Mapped gene | LOC105371627 - SEC16B |
Upstream gene id | 105371627 |
Downstream gene id | 89866 |
SNP gene ids | |
Upstream gene distance | 78503 |
Downstream gene distance | 25032 |
SNP risk allele | rs574367-T |
SNPs | rs574367 |
Merged | 0 |
SNP id current | 574367 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.21 |
P value | 2E-19 |
Pvalue mlog | 18.698970004336 |
P value text | |
Or beta | 0.058 |
%95 Ci | [0.045-0.071] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002461 |