Human SNP ID | rs573332 |
---|---|
Human chromosome | chr4 |
Human SNP position | 13120911 |
Pig chromosome | chr8 |
Pig SNP position | 8291629 |
PubMed ID | 22041458 |
---|---|
Journal | Psychol Med |
Link | www.ncbi.nlm.nih.gov/pubmed/22041458 |
Study | Pharmacogenomic study of side-effects for antidepressant treatment options in STAR*D. |
Disease/Trait | Response to anti-depressant treatment in major depressive disorder |
Initial sample | 1,151 European ancestry cases, 288 African American cases |
Replication sample | NA |
Region | 4p15.33 |
Chromosome id | chr4 |
Chromosome position | 13120911 |
Reported gene | intergenic |
Mapped gene | LOC105374494 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105374494 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs573332-G |
SNPs | rs573332 |
Merged | 0 |
SNP id current | 573332 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.11 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (Citalopram+Buspirone, Dizziness) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [421789] |
CNV | N |
Mapped trait | response to citalopram, antidepressant-induced dizziness, response to buspirone, response to antidepressant |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006329, http://www.ebi.ac.uk/efo/EFO_0006321, http://www.ebi.ac.uk/efo/EFO_0006330, http://purl.obolibrary.org/obo/GO_0036276 |
Study accession | GCST001308 |