SNP Detail For rs573332
1.Mapping Information
Human SNP ID rs573332
Human chromosome chr4
Human SNP position 13120911
Pig chromosome chr8
Pig SNP position 8291629
2.Annotation Information
PubMed ID22041458
JournalPsychol Med
Linkwww.ncbi.nlm.nih.gov/pubmed/22041458
StudyPharmacogenomic study of side-effects for antidepressant treatment options in STAR*D.
Disease/TraitResponse to anti-depressant treatment in major depressive disorder
Initial sample1,151 European ancestry cases, 288 African American cases
Replication sampleNA
Region4p15.33
Chromosome idchr4
Chromosome position13120911
Reported geneintergenic
Mapped geneLOC105374494
Upstream gene id
Downstream gene id
SNP gene ids105374494
Upstream gene distance
Downstream gene distance
SNP risk allelers573332-G
SNPsrs573332
Merged0
SNP id current573332
Contextintergenic_variant
Intergenic0
Allele frequency0.11
P value0.000001
Pvalue mlog6
P value text(Citalopram+Buspirone, Dizziness)
Or beta
%95 Ci
PlatformAffymetrix [421789]
CNVN
Mapped traitresponse to citalopram, antidepressant-induced dizziness, response to buspirone, response to antidepressant
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006329, http://www.ebi.ac.uk/efo/EFO_0006321, http://www.ebi.ac.uk/efo/EFO_0006330, http://purl.obolibrary.org/obo/GO_0036276
Study accessionGCST001308