SNP Detail For rs57064725
1.Mapping Information
Human SNP ID rs57064725
Human chromosome chr15
Human SNP position 78540694
Pig chromosome chr7
Pig SNP position 52938664
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region15q25.1
Chromosome idchr15
Chromosome position78540694
Reported genePSMA4
Mapped genePSMA4
Upstream gene id
Downstream gene id
SNP gene ids5685
Upstream gene distance
Downstream gene distance
SNP risk allelers57064725-A
SNPsrs57064725
Merged0
SNP id current57064725
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.273
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta0.052
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262