SNP Detail For rs56988800
1.Mapping Information
Human SNP ID rs56988800
Human chromosome chr2
Human SNP position 71460988
Pig chromosome chr3
Pig SNP position 74667379
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitPR interval in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region2p13.2
Chromosome idchr2
Chromosome position71460988
Reported geneDYSF
Mapped geneDYSF
Upstream gene id
Downstream gene id
SNP gene ids8291
Upstream gene distance
Downstream gene distance
SNP risk allelers56988800-?
SNPsrs56988800
Merged0
SNP id current56988800
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitPR interval, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002279