Human SNP ID | rs569805 |
---|---|
Human chromosome | chr2 |
Human SNP position | 168926370 |
Pig chromosome | chr15 |
Pig SNP position | 84510389 |
PubMed ID | 21386085 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/21386085 |
Study | A bivariate genome-wide approach to metabolic syndrome: STAMPEED consortium. |
Disease/Trait | Metabolic syndrome (bivariate traits) |
Initial sample | 22,161 European ancestry individuals |
Replication sample | NA |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 168926370 |
Reported gene | ABCB11 |
Mapped gene | ABCB11 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 8647 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs569805-A |
SNPs | rs569805 |
Merged | 0 |
SNP id current | 569805 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000009 |
Pvalue mlog | 7.04575749056067 |
P value text | (HDLC-GLUC) |
Or beta | 0.16 |
%95 Ci | [0.10-0.22] unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | metabolic syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000195 |
Study accession | GCST001007 |