Human SNP ID | rs564148 |
---|---|
Human chromosome | chr1 |
Human SNP position | 33708220 |
Pig chromosome | chr6 |
Pig SNP position | 84064984 |
PubMed ID | 22952603 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22952603 |
Study | Genome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13). |
Disease/Trait | Response to amphetamines |
Initial sample | 1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals |
Replication sample | NA |
Region | 1p35.1 |
Chromosome id | chr1 |
Chromosome position | 33708220 |
Reported gene | CSMD2 |
Mapped gene | CSMD2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 114784 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs564148-? |
SNPs | rs564148 |
Merged | 0 |
SNP id current | 564148 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (SF10) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [5476100] (imputed) |
CNV | N |
Mapped trait | response to drug |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042493 |
Study accession | GCST001651 |