SNP Detail For rs56404102
1.Mapping Information
Human SNP ID rs56404102
Human chromosome chr4
Human SNP position 104874359
Pig chromosome chr8
Pig SNP position 125481586
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region4q24
Chromosome idchr4
Chromosome position104874359
Reported geneIntergenic
Mapped geneLOC101929468 - RPL6P14
Upstream gene id101929468
Downstream gene id391679
SNP gene ids
Upstream gene distance176767
Downstream gene distance11751
SNP risk allelers56404102-C
SNPsrs56404102
Merged0
SNP id current56404102
Contextintron_variant
Intergenic1
Allele frequency0.987
P value0.000003
Pvalue mlog5.52287874528033
P value text(AA)
Or beta0.072
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264