SNP Detail For rs563694
1.Mapping Information
Human SNP ID rs563694
Human chromosome chr2
Human SNP position 168917561
Pig chromosome chr15
Pig SNP position 84503235
2.Annotation Information
PubMed ID18521185
JournalJ Clin Invest
Linkwww.ncbi.nlm.nih.gov/pubmed/18521185
StudyVariations in the G6PC2/ABCB11 genomic region are associated with fasting glucose levels.
Disease/TraitFasting plasma glucose
Initial sample5,088 European ancestry individuals
Replication sample18,436 European ancestry individuals
Region2q31.1
Chromosome idchr2
Chromosome position168917561
Reported geneG6PC2, ABCB11
Mapped geneG6PC2 - ABCB11
Upstream gene id57818
Downstream gene id8647
SNP gene ids
Upstream gene distance7561
Downstream gene distance5241
SNP risk allelers563694-C
SNPsrs563694
Merged0
SNP id current563694
Contextupstream_gene_variant
Intergenic1
Allele frequency0.34
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta
%95 Ci
PlatformIllumina [315635]
CNVN
Mapped traitfasting blood glucose measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004465
Study accessionGCST000202