Human SNP ID | rs563694 |
---|---|
Human chromosome | chr2 |
Human SNP position | 168917561 |
Pig chromosome | chr15 |
Pig SNP position | 84503235 |
PubMed ID | 18521185 |
---|---|
Journal | J Clin Invest |
Link | www.ncbi.nlm.nih.gov/pubmed/18521185 |
Study | Variations in the G6PC2/ABCB11 genomic region are associated with fasting glucose levels. |
Disease/Trait | Fasting plasma glucose |
Initial sample | 5,088 European ancestry individuals |
Replication sample | 18,436 European ancestry individuals |
Region | 2q31.1 |
Chromosome id | chr2 |
Chromosome position | 168917561 |
Reported gene | G6PC2, ABCB11 |
Mapped gene | G6PC2 - ABCB11 |
Upstream gene id | 57818 |
Downstream gene id | 8647 |
SNP gene ids | |
Upstream gene distance | 7561 |
Downstream gene distance | 5241 |
SNP risk allele | rs563694-C |
SNPs | rs563694 |
Merged | 0 |
SNP id current | 563694 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.34 |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [315635] |
CNV | N |
Mapped trait | fasting blood glucose measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004465 |
Study accession | GCST000202 |