SNP Detail For rs56219066
1.Mapping Information
Human SNP ID rs56219066
Human chromosome chr5
Human SNP position 95907227
Pig chromosome chr2
Pig SNP position 106424421
2.Annotation Information
PubMed ID26007630
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26007630
StudyVariants in ELL2 influencing immunoglobulin levels associate with multiple myeloma.
Disease/TraitMultiple myeloma
Initial sample2,194 European ancestry cases, 222,555 European ancestry controls
Replication sample586 European ancestry cases, 2,111 European ancestry controls
Region5q15
Chromosome idchr5
Chromosome position95907227
Reported geneELL2
Mapped geneELL2
Upstream gene id
Downstream gene id
SNP gene ids22936
Upstream gene distance
Downstream gene distance
SNP risk allelers56219066-T
SNPsrs56219066
Merged
SNP id current56219066
Contextintron_variant
Intergenic0
Allele frequency0.711
P value0.000000001
Pvalue mlog9
P value text
Or beta1.25
%95 Ci[1.16-1.34]
PlatformIllumina [12100000] (imputed)
CNVN
Mapped traitmultiple myeloma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001378
Study accessionGCST002921
PubMed ID26007630
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26007630
StudyVariants in ELL2 influencing immunoglobulin levels associate with multiple myeloma.
Disease/TraitMultiple myeloma and monoclonal gammopathy
Initial sample2,194 European ancestry multiple myeloma cases, 251 European ancestry monoclonal gammopathy cases, 294,390 European ancestry controls
Replication sample586 European ancestry multiple myeloma cases, 2,111 European ancestry controls
Region5q15
Chromosome idchr5
Chromosome position95907227
Reported geneELL2
Mapped geneELL2
Upstream gene id
Downstream gene id
SNP gene ids22936
Upstream gene distance
Downstream gene distance
SNP risk allelers56219066-T
SNPsrs56219066
Merged
SNP id current56219066
Contextintron_variant
Intergenic0
Allele frequency0.711
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta1.24
%95 Ci[1.16-1.33]
PlatformIllumina [12100000] (imputed)
CNVN
Mapped traitmultiple myeloma, monoclonal gammopathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001378, http://www.ebi.ac.uk/efo/EFO_0000203
Study accessionGCST002922