SNP Detail For rs56144287
1.Mapping Information
Human SNP ID rs56144287
Human chromosome chr11
Human SNP position 120633858
Pig chromosome chr9
Pig SNP position 52784385
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1 in COPD
Initial sample5,439 European ancestry current and former smoker cases, 821 African American current and former smoker cases
Replication sampleNA
Region11q23.3
Chromosome idchr11
Chromosome position120633858
Reported geneGRIK4
Mapped geneGRIK4
Upstream gene id
Downstream gene id
SNP gene ids2900
Upstream gene distance
Downstream gene distance
SNP risk allelers56144287-A
SNPsrs56144287
Merged0
SNP id current56144287
Contextintron_variant
Intergenic0
Allele frequency0.959
P value0.000001
Pvalue mlog6
P value text(AA)
Or beta0.333
%95 CiNR unit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST003263