SNP Detail For rs560713
1.Mapping Information
Human SNP ID rs560713
Human chromosome chr6
Human SNP position 136183898
Pig chromosome chr1
Pig SNP position 31423662
2.Annotation Information
PubMed ID24002674
JournalHum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24002674
StudyGenome-wide association study and meta-analysis of intraocular pressure.
Disease/TraitIntraocular pressure
Initial sample2,847 European ancestry primary open angle glaucoma cases, 3,389 European ancestry controls
Replication sampleNA
Region6q23.3
Chromosome idchr6
Chromosome position136183898
Reported genePDE7B
Mapped genePDE7B
Upstream gene id
Downstream gene id
SNP gene ids27115
Upstream gene distance
Downstream gene distance
SNP risk allelers560713-A
SNPsrs560713
Merged0
SNP id current560713
Contextintron_variant
Intergenic0
Allele frequency0.32
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.53
%95 Ci[0.24-0.82] mmHg decrease
PlatformIllumina [466573]
CNVN
Mapped traitintraocular pressure measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004695
Study accessionGCST002168