Human SNP ID | rs558718 |
---|---|
Human chromosome | chr19 |
Human SNP position | 7844997 |
Pig chromosome | chr2 |
Pig SNP position | 71754186 |
PubMed ID | 20205591 |
---|---|
Journal | J Infect Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/20205591 |
Study | Host determinants of HIV-1 control in African Americans. |
Disease/Trait | HIV-1 viral setpoint |
Initial sample | 515 African American cases |
Replication sample | NA |
Region | 19p13.2 |
Chromosome id | chr19 |
Chromosome position | 7844997 |
Reported gene | EVI5L |
Mapped gene | EVI5L |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 115704 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs558718-? |
SNPs | rs558718 |
Merged | 0 |
SNP id current | 558718 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.11 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [1212217] |
CNV | N |
Mapped trait | HIV-1 infection |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000180 |
Study accession | GCST000656 |