Human SNP ID | rs555091 |
---|---|
Human chromosome | chr11 |
Human SNP position | 31511412 |
Pig chromosome | chr2 |
Pig SNP position | 31735607 |
PubMed ID | 25027321 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25027321 |
Study | Genome-wide association and admixture analysis of glaucoma in the Women__s Health Initiative. |
Disease/Trait | Glaucoma |
Initial sample | 658 African American prevalent cases, 1,062 African American incident cases, 6,067 African American controls, 153 Hispanic prevalent cases, 336 Hispanic incident cases, 2,685 Hispanic controls |
Replication sample | NA |
Region | 11p13 |
Chromosome id | chr11 |
Chromosome position | 31511412 |
Reported gene | ELP4 |
Mapped gene | ELP4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 26610 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs555091-C |
SNPs | rs555091 |
Merged | 0 |
SNP id current | 555091 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.018 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | (AA) |
Or beta | 1.92 |
%95 Ci | [1.53-2.41] |
Platform | Affymetrix [up to 15784307] (imputed) |
CNV | N |
Mapped trait | glaucoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000516 |
Study accession | GCST002529 |