SNP Detail For rs543650
1.Mapping Information
Human SNP ID rs543650
Human chromosome chr6
Human SNP position 151789808
Pig chromosome chr1
Pig SNP position 16922678
2.Annotation Information
PubMed ID20881960
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/20881960
StudyHundreds of variants clustered in genomic loci and biological pathways affect human height.
Disease/TraitHeight
Initial sample133,653 European ancestry individuals
Replication sample50,074 European ancestry individuals
Region6q25.1
Chromosome idchr6
Chromosome position151789808
Reported geneESR1
Mapped geneESR1
Upstream gene id
Downstream gene id
SNP gene ids2099
Upstream gene distance
Downstream gene distance
SNP risk allelers543650-T
SNPsrs543650
Merged0
SNP id current543650
Contextintron_variant
Intergenic0
Allele frequency0.4
P value0.00000000000000001
Pvalue mlog17
P value text
Or beta0.034
%95 Ci[NR] unit decrease
PlatformAffymetrix, Illumina [2834208] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000817