SNP Detail For rs533123
1.Mapping Information
Human SNP ID rs533123
Human chromosome chr1
Human SNP position 28814643
Pig chromosome chr6
Pig SNP position 79624341
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region1p35.3
Chromosome idchr1
Chromosome position28814643
Reported geneNR
Mapped geneOPRD1
Upstream gene id
Downstream gene id
SNP gene ids4985
Upstream gene distance
Downstream gene distance
SNP risk allelers533123-A
SNPsrs533123
Merged
SNP id current533123
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.08
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048