Human SNP ID | rs531930 |
---|---|
Human chromosome | chr6 |
Human SNP position | 124422361 |
Pig chromosome | chr1 |
Pig SNP position | 42522493 |
PubMed ID | 24999842 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24999842 |
Study | Genome-wide association study of celiac disease in North America confirms FRMD4B as new celiac locus. |
Disease/Trait | Celiac disease |
Initial sample | 1,550 European ancestry cases, 3,084 European ancestry controls |
Replication sample | NA |
Region | 6q22.31 |
Chromosome id | chr6 |
Chromosome position | 124422361 |
Reported gene | NKAIN2 |
Mapped gene | NKAIN2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 154215 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs531930-? |
SNPs | rs531930 |
Merged | 0 |
SNP id current | 531930 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | |
Or beta | 1.3 |
%95 Ci | [1.17鈥?.44] |
Platform | Illumina [517345] |
CNV | N |
Mapped trait | celiac disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001060 |
Study accession | GCST002520 |