Human SNP ID | rs531676 |
---|---|
Human chromosome | chr10 |
Human SNP position | 97877821 |
Pig chromosome | JH118839-1 |
Pig SNP position | 128304 |
PubMed ID | 20694148 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/20694148 |
Study | A genome-wide association study of the metabolic syndrome in Indian Asian men. |
Disease/Trait | Metabolic syndrome |
Initial sample | 2,554 Indian Asian ancestry individuals |
Replication sample | 2,240 Indian Asian ancestry individuals |
Region | 10q24.2 |
Chromosome id | chr10 |
Chromosome position | 97877821 |
Reported gene | CRTAC1 |
Mapped gene | CRTAC1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55118 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs531676-? |
SNPs | rs531676 |
Merged | 0 |
SNP id current | 531676 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.45 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (T2D) |
Or beta | |
%95 Ci | |
Platform | Illumina [308011] |
CNV | N |
Mapped trait | type II diabetes mellitus, metabolic syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360, http://www.ebi.ac.uk/efo/EFO_0000195 |
Study accession | GCST000753 |