SNP Detail For rs518167
1.Mapping Information
Human SNP ID rs518167
Human chromosome chr11
Human SNP position 88934972
Pig chromosome chr9
Pig SNP position 24799456
2.Annotation Information
PubMed ID24532677
JournalAnn Rheum Dis
Linkwww.ncbi.nlm.nih.gov/pubmed/24532677
StudyA genome-wide association study of rheumatoid arthritis without antibodies against citrullinated peptides.
Disease/TraitRheumatoid arthritis (ACPA-negative)
Initial sample1,148 European ancestry cases, 6,008 European ancestry controls
Replication sample774 European ancestry cases, 1,079 European ancestry controls
Region11q14.3
Chromosome idchr11
Chromosome position88934972
Reported geneGRM5
Mapped geneGRM5
Upstream gene id
Downstream gene id
SNP gene ids2915
Upstream gene distance
Downstream gene distance
SNP risk allelers518167-?
SNPsrs518167
Merged0
SNP id current518167
Contextintron_variant
Intergenic0
Allele frequency
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta2.24
%95 Ci[NR]
PlatformIllumina [452367]
CNVN
Mapped traitrheumatoid arthritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000685
Study accessionGCST002357