Human SNP ID | rs514475 |
---|---|
Human chromosome | chr6 |
Human SNP position | 137717768 |
Pig chromosome | chr1 |
Pig SNP position | 29927008 |
PubMed ID | 25574825 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25574825 |
Study | Genome-wide Comparative Analysis of Atopic Dermatitis and Psoriasis Gives Insight into Opposing Genetic Mechanisms. |
Disease/Trait | Inflammatory skin disease |
Initial sample | 2,079 European ancestry atopic dermatitis cases, 4,212 European ancestry psoriasis cases, 11,899 European ancestry controls |
Replication sample | NA |
Region | 6q23.3 |
Chromosome id | chr6 |
Chromosome position | 137717768 |
Reported gene | AL357060.1 |
Mapped gene | LOC442263 - LOC100507406 |
Upstream gene id | 442263 |
Downstream gene id | 100507406 |
SNP gene ids | |
Upstream gene distance | 10548 |
Downstream gene distance | 12402 |
SNP risk allele | rs514475-? |
SNPs | rs514475 |
Merged | 0 |
SNP id current | 514475 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.00000006 |
Pvalue mlog | 7.22184874961635 |
P value text | (Psoriasis) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 5200000] |
CNV | N |
Mapped trait | psoriasis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000676 |
Study accession | GCST002740 |