Human SNP ID | rs508487 |
---|---|
Human chromosome | chr11 |
Human SNP position | 117204850 |
Pig chromosome | chr9 |
Pig SNP position | 49636757 |
PubMed ID | 21943158 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21943158 |
Study | Genetic variants in LPL, OASL and TOMM40/APOE-C1-C2-C4 genes are associated with multiple cardiovascular-related traits. |
Disease/Trait | Cardiovascular disease risk factors |
Initial sample | 11,683 European ancestry individuals |
Replication sample | NA |
Region | 11q23.3 |
Chromosome id | chr11 |
Chromosome position | 117204850 |
Reported gene | PCSK7 |
Mapped gene | TAGLN - PCSK7 |
Upstream gene id | 6876 |
Downstream gene id | 9159 |
SNP gene ids | |
Upstream gene distance | 58 |
Downstream gene distance | 221 |
SNP risk allele | rs508487-T |
SNPs | rs508487 |
Merged | 0 |
SNP id current | 508487 |
Context | 3_prime_UTR_variant |
Intergenic | 1 |
Allele frequency | 0.04 |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | (TRIG) |
Or beta | 0.235 |
%95 Ci | [0.16-0.31] mmol/l increase |
Platform | Illumina [NR] (imputed) |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST001247 |