Human SNP ID | rs506338 |
---|---|
Human chromosome | chr11 |
Human SNP position | 64673448 |
Pig chromosome | chr2 |
Pig SNP position | 6624069 |
PubMed ID | 20139978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20139978 |
Study | Genome-wide association study of hematological and biochemical traits in a Japanese population. |
Disease/Trait | Urate levels |
Initial sample | 8,868 Japanese ancestry individuals |
Replication sample | NA |
Region | 11q13.1 |
Chromosome id | chr11 |
Chromosome position | 64673448 |
Reported gene | SLC22A12 |
Mapped gene | NRXN2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9379 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs506338-C |
SNPs | rs506338 |
Merged | 0 |
SNP id current | 506338 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.17 |
P value | 2E-31 |
Pvalue mlog | 30.698970004336 |
P value text | |
Or beta | 0.229 |
%95 Ci | [0.19-0.27] unit decrease |
Platform | Illumina [561583] |
CNV | N |
Mapped trait | urate measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531 |
Study accession | GCST000581 |