SNP Detail For rs5029317
1.Mapping Information
Human SNP ID rs5029317
Human chromosome chr8
Human SNP position 128114607
Pig chromosome chr4
Pig SNP position 12480450
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region8q24.21
Chromosome idchr8
Chromosome position128114607
Reported genePVT1
Mapped genePVT1 - MIR1208
Upstream gene id5820
Downstream gene id100302281
SNP gene ids
Upstream gene distance13354
Downstream gene distance35509
SNP risk allelers5029317-?
SNPsrs5029317
Merged0
SNP id current5029317
Contextupstream_gene_variant
Intergenic1
Allele frequency
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337