Human SNP ID | rs5017948 |
---|---|
Human chromosome | chr11 |
Human SNP position | 54705062 |
Pig chromosome | chr1 |
Pig SNP position | 313014777 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 11q11 |
Chromosome id | chr11 |
Chromosome position | 54705062 |
Reported gene | OR4A5 |
Mapped gene | OR4A4P - OR4A5 |
Upstream gene id | 390134 |
Downstream gene id | 81318 |
SNP gene ids | |
Upstream gene distance | 44466 |
Downstream gene distance | 1770 |
SNP risk allele | rs5017948-A |
SNPs | rs5017948 |
Merged | 0 |
SNP id current | 5017948 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.18 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 0.027 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |