SNP Detail For rs5017948
1.Mapping Information
Human SNP ID rs5017948
Human chromosome chr11
Human SNP position 54705062
Pig chromosome chr1
Pig SNP position 313014777
2.Annotation Information
PubMed ID20881960
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/20881960
StudyHundreds of variants clustered in genomic loci and biological pathways affect human height.
Disease/TraitHeight
Initial sample133,653 European ancestry individuals
Replication sample50,074 European ancestry individuals
Region11q11
Chromosome idchr11
Chromosome position54705062
Reported geneOR4A5
Mapped geneOR4A4P - OR4A5
Upstream gene id390134
Downstream gene id81318
SNP gene ids
Upstream gene distance44466
Downstream gene distance1770
SNP risk allelers5017948-A
SNPsrs5017948
Merged0
SNP id current5017948
Contextupstream_gene_variant
Intergenic1
Allele frequency0.18
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta0.027
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [2834208] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000817