Human SNP ID | rs499818 |
---|---|
Human chromosome | chr6 |
Human SNP position | 13332235 |
Pig chromosome | chr7 |
Pig SNP position | 10052428 |
PubMed ID | 17903304 |
---|---|
Journal | BMC Med Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/17903304 |
Study | Framingham Heart Study 100K project: genome-wide associations for cardiovascular disease outcomes. |
Disease/Trait | Major CVD |
Initial sample | 142 cases and 1,203 controls from 310 families |
Replication sample | NA |
Region | 6p24.1 |
Chromosome id | chr6 |
Chromosome position | 13332235 |
Reported gene | intergenic |
Mapped gene | TBC1D7 - LOC105374936 |
Upstream gene id | 51256 |
Downstream gene id | 105374936 |
SNP gene ids | |
Upstream gene distance | 3652 |
Downstream gene distance | 18848 |
SNP risk allele | rs499818-? |
SNPs | rs499818 |
Merged | 0 |
SNP id current | 499818 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (major CVD) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [70897] |
CNV | N |
Mapped trait | cardiovascular disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000319 |
Study accession | GCST000093 |