SNP Detail For rs499818
1.Mapping Information
Human SNP ID rs499818
Human chromosome chr6
Human SNP position 13332235
Pig chromosome chr7
Pig SNP position 10052428
2.Annotation Information
PubMed ID17903304
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903304
StudyFramingham Heart Study 100K project: genome-wide associations for cardiovascular disease outcomes.
Disease/TraitMajor CVD
Initial sample142 cases and 1,203 controls from 310 families
Replication sampleNA
Region6p24.1
Chromosome idchr6
Chromosome position13332235
Reported geneintergenic
Mapped geneTBC1D7 - LOC105374936
Upstream gene id51256
Downstream gene id105374936
SNP gene ids
Upstream gene distance3652
Downstream gene distance18848
SNP risk allelers499818-?
SNPsrs499818
Merged0
SNP id current499818
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text(major CVD)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitcardiovascular disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000319
Study accessionGCST000093