SNP Detail For rs4982731
1.Mapping Information
Human SNP ID rs4982731
Human chromosome chr14
Human SNP position 23116124
Pig chromosome chr7
Pig SNP position 81269340
2.Annotation Information
PubMed ID23512250
JournalJ Natl Cancer Inst
Linkwww.ncbi.nlm.nih.gov/pubmed/23512250
StudyNovel susceptibility variants at 10p12.31-12.2 for childhood acute lymphoblastic leukemia in ethnically diverse populations.
Disease/TraitAcute lymphoblastic leukemia (childhood)
Initial sample972 European ancestry cases, 1,386 European ancestry controls, 89 African American cases, 1,363 African American controls, 305 Hispanic cases, 1,008 Hispanic controls
Replication sample574 European ancestry cases, 2,601 European ancestry controls, 128 African American cases, 1,075 African American controls, 143 Hispanic cases, 640 Hispanic controls
Region14q11.2
Chromosome idchr14
Chromosome position23116124
Reported geneCEBPE
Mapped geneLOC100128908 - CEBPE
Upstream gene id100128908
Downstream gene id1053
SNP gene ids
Upstream gene distance10320
Downstream gene distance1182
SNP risk allelers4982731-C
SNPsrs4982731
Merged0
SNP id current4982731
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.28
P value0.000000000009
Pvalue mlog11.0457574905606
P value text
Or beta1.36
%95 Ci[1.24-1.48]
PlatformAffymetrix [709059]
CNVN
Mapped traitacute lymphoblastic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000220
Study accessionGCST001912