Human SNP ID | rs4982731 |
---|---|
Human chromosome | chr14 |
Human SNP position | 23116124 |
Pig chromosome | chr7 |
Pig SNP position | 81269340 |
PubMed ID | 23512250 |
---|---|
Journal | J Natl Cancer Inst |
Link | www.ncbi.nlm.nih.gov/pubmed/23512250 |
Study | Novel susceptibility variants at 10p12.31-12.2 for childhood acute lymphoblastic leukemia in ethnically diverse populations. |
Disease/Trait | Acute lymphoblastic leukemia (childhood) |
Initial sample | 972 European ancestry cases, 1,386 European ancestry controls, 89 African American cases, 1,363 African American controls, 305 Hispanic cases, 1,008 Hispanic controls |
Replication sample | 574 European ancestry cases, 2,601 European ancestry controls, 128 African American cases, 1,075 African American controls, 143 Hispanic cases, 640 Hispanic controls |
Region | 14q11.2 |
Chromosome id | chr14 |
Chromosome position | 23116124 |
Reported gene | CEBPE |
Mapped gene | LOC100128908 - CEBPE |
Upstream gene id | 100128908 |
Downstream gene id | 1053 |
SNP gene ids | |
Upstream gene distance | 10320 |
Downstream gene distance | 1182 |
SNP risk allele | rs4982731-C |
SNPs | rs4982731 |
Merged | 0 |
SNP id current | 4982731 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.28 |
P value | 0.000000000009 |
Pvalue mlog | 11.0457574905606 |
P value text | |
Or beta | 1.36 |
%95 Ci | [1.24-1.48] |
Platform | Affymetrix [709059] |
CNV | N |
Mapped trait | acute lymphoblastic leukemia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000220 |
Study accession | GCST001912 |