SNP Detail For rs4982029
1.Mapping Information
Human SNP ID rs4982029
Human chromosome chr14
Human SNP position 33007060
Pig chromosome chr7
Pig SNP position 71585687
2.Annotation Information
PubMed ID20713499
JournalAm J Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/20713499
StudyCross-disorder genomewide analysis of schizophrenia, bipolar disorder, and depression.
Disease/TraitSchizophrenia, bipolar disorder and depression (combined)
Initial sample402 European ancestry schizophrenia cases, 1,021 European ancestry bipolar I cases, 493 European ancestry bipolar II cases, 1,210 European ancestry MDD cases, 1,060 European ancestry controls
Replication sampleNA
Region14q13.1
Chromosome idchr14
Chromosome position33007060
Reported geneNPAS3
Mapped geneNPAS3
Upstream gene id
Downstream gene id
SNP gene ids64067
Upstream gene distance
Downstream gene distance
SNP risk allelers4982029-A
SNPsrs4982029
Merged0
SNP id current4982029
Contextintron_variant
Intergenic0
Allele frequency0.02
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformAffymetrix, Perlegen [1574154] (imputed)
CNVN
Mapped traitunipolar depression, mental or behavioural disorder, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0000677, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST000774