SNP Detail For rs4980079
1.Mapping Information
Human SNP ID rs4980079
Human chromosome chr10
Human SNP position 79434463
Pig chromosome JH118438-1
Pig SNP position 47944
2.Annotation Information
PubMed ID26154020
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/26154020
StudyA genome-wide screening and SNPs-to-genes approach to identify novel genetic risk factors associated with frontotemporal dementia.
Disease/TraitFrontotemporal dementia
Initial sample530 European ancestry cases, 926 European ancestry controls
Replication sampleNA
Region10q22.3
Chromosome idchr10
Chromosome position79434463
Reported geneZCCHC24
Mapped geneZCCHC24
Upstream gene id
Downstream gene id
SNP gene ids219654
Upstream gene distance
Downstream gene distance
SNP risk allelers4980079-T
SNPsrs4980079
Merged
SNP id current4980079
Contextintron_variant
Intergenic0
Allele frequency0.45
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.46
%95 Ci[1.30-1.62]
PlatformIllumina [2292247] (imputed)
CNVN
Mapped traitFrontotemporal dementia
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_282
Study accessionGCST002960