Human SNP ID | rs4979078 |
---|---|
Human chromosome | chr9 |
Human SNP position | 112060841 |
Pig chromosome | chr1 |
Pig SNP position | 283628770 |
PubMed ID | 23650146 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/23650146 |
Study | A genome-wide association study for venous thromboembolism: the extended cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium. |
Disease/Trait | Venous thromboembolism |
Initial sample | 1,618 European ancestry cases, 42,881 European ancestry controls |
Replication sample | 3,231 European ancestry cases, 3,536 European ancestry controls |
Region | 9q31.3 |
Chromosome id | chr9 |
Chromosome position | 112060841 |
Reported gene | SUSD1 |
Mapped gene | SUSD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 64420 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs4979078-C |
SNPs | rs4979078 |
Merged | 0 |
SNP id current | 4979078 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.86 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.21 |
%95 Ci | [1.11-1.30] |
Platform | Affymetrix, Illumina [2543885] (imputed) |
CNV | N |
Mapped trait | venous thromboembolism |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004286 |
Study accession | GCST002012 |