SNP Detail For rs4954192
1.Mapping Information
Human SNP ID rs4954192
Human chromosome chr2
Human SNP position 134875411
Pig chromosome chr15
Pig SNP position 19540856
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region2q21.3
Chromosome idchr2
Chromosome position134875411
Reported geneACMSD, TMEM163, CCNT2
Mapped geneCCNT2-AS1, ACMSD
Upstream gene id
Downstream gene id
SNP gene ids100129961, 130013
Upstream gene distance
Downstream gene distance
SNP risk allelers4954192-A
SNPsrs4954192
Merged0
SNP id current4954192
Contextintron_variant
Intergenic0
Allele frequency0.41
P value0.0000006
Pvalue mlog6.22184874961635
P value text
Or beta2.36
%95 Ci[1.67-3.34]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875