SNP Detail For rs495366
1.Mapping Information
Human SNP ID rs495366
Human chromosome chr11
Human SNP position 102824377
Pig chromosome chr9
Pig SNP position 37384061
2.Annotation Information
PubMed ID20031604
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031604
StudyGenome-wide association scan identifies variants near Matrix Metalloproteinase (MMP) genes on chromosome 11q21-22 strongly associated with serum MMP-1 levels.
Disease/TraitMatrix metalloproteinase levels
Initial sample778 Old Order Amish individuals
Replication sampleNA
Region11q22.2
Chromosome idchr11
Chromosome position102824377
Reported geneMMP
Mapped geneWTAPP1
Upstream gene id
Downstream gene id
SNP gene ids100288077
Upstream gene distance
Downstream gene distance
SNP risk allelers495366-A
SNPsrs495366
Merged0
SNP id current495366
Contextintron_variant
Intergenic0
Allele frequency0.36
P value6E-34
Pvalue mlog33.2218487496163
P value text
Or beta0.44
%95 Ci[NR] unit decrease
PlatformAffymetrix [338079]
CNVN
Mapped traitmatrix metalloproteinase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004744
Study accessionGCST000450