SNP Detail For rs4947962
1.Mapping Information
Human SNP ID rs4947962
Human chromosome chr7
Human SNP position 55008114
Pig chromosome chr9
Pig SNP position 153644698
2.Annotation Information
PubMed ID26503763
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/26503763
StudyGenome-wide association study identifies SESTD1 as a novel risk gene for lithium-responsive bipolar disorder.
Disease/TraitSubjective response to lithium treatment
Initial sample1,639 European ancestry bipolar disorder responder cases, 8,899 European ancestry controls
Replication sampleNA
Region7p11.2
Chromosome idchr7
Chromosome position55008114
Reported geneEGFR
Mapped geneLOC105375284 - EGFR
Upstream gene id105375284
Downstream gene id1956
SNP gene ids
Upstream gene distance12495
Downstream gene distance10918
SNP risk allelers4947962-G
SNPsrs4947962
Merged0
SNP id current4947962
Contextintergenic_variant
Intergenic1
Allele frequency0.11
P value0.000001
Pvalue mlog6
P value text
Or beta1.35
%95 Ci[NR]
PlatformAffymetrix, Illumina [> 8000000] (imputed)
CNVN
Mapped traitbipolar disorder, response to lithium ion
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://purl.obolibrary.org/obo/GO_0010226
Study accessionGCST003158