Human SNP ID | rs4947339 |
---|---|
Human chromosome | chr6 |
Human SNP position | 28948475 |
Pig chromosome | chr7 |
Pig SNP position | 24467797 |
PubMed ID | 20526338 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20526338 |
Study | Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in response to agonists. |
Disease/Trait | Platelet aggregation |
Initial sample | Up to 3,991 European ancestry individuals |
Replication sample | Up to 840 African American individuals |
Region | 6p22.1 |
Chromosome id | chr6 |
Chromosome position | 28948475 |
Reported gene | TRIM27 |
Mapped gene | TRM-CAT3-1 - TRK-TTT3-5 |
Upstream gene id | 100189216 |
Downstream gene id | 100189234 |
SNP gene ids | |
Upstream gene distance | 3828 |
Downstream gene distance | 2554 |
SNP risk allele | rs4947339-T |
SNPs | rs4947339 |
Merged | 0 |
SNP id current | 4947339 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.438 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (epinehprine) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2330000] (imputed) |
CNV | N |
Mapped trait | platelet aggregation |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0070527 |
Study accession | GCST000693 |