SNP Detail For rs4938802
1.Mapping Information
Human SNP ID rs4938802
Human chromosome chr11
Human SNP position 120358280
Pig chromosome chr9
Pig SNP position 52570712
2.Annotation Information
PubMed ID25637523
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25637523
StudyARHGEF12 influences the risk of glaucoma by increasing intraocular pressure.
Disease/TraitIntraocular pressure
Initial sample8,015 individuals
Replication sample7,471 individuals
Region11q23.3
Chromosome idchr11
Chromosome position120358280
Reported genegenic
Mapped geneARHGEF12
Upstream gene id
Downstream gene id
SNP gene ids23365
Upstream gene distance
Downstream gene distance
SNP risk allelers4938802-A
SNPsrs4938802
Merged0
SNP id current4938802
Contextintron_variant
Intergenic0
Allele frequency
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.24
%95 Ci[0.14-0.34] unit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitintraocular pressure measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004695
Study accessionGCST002767