SNP Detail For rs4938303
1.Mapping Information
Human SNP ID rs4938303
Human chromosome chr11
Human SNP position 116714271
Pig chromosome chr9
Pig SNP position 49174617
2.Annotation Information
PubMed ID20864672
JournalArterioscler Thromb Vasc Biol
Linkwww.ncbi.nlm.nih.gov/pubmed/20864672
StudyGenetic variants influencing circulating lipid levels and risk of coronary artery disease.
Disease/TraitTriglycerides
Initial sampleup to 17,723 European ancestry individuals
Replication sampleup to 37,774 European ancestry individuals, up to 9,665 Indian Asian ancestry individuals
Region11q23.3
Chromosome idchr11
Chromosome position116714271
Reported geneZNF259, APOA1, APOC3, APOA4, APOA5, BUD13
Mapped geneLOC101929011 - BUD13
Upstream gene id101929011
Downstream gene id84811
SNP gene ids
Upstream gene distance56019
Downstream gene distance33899
SNP risk allelers4938303-T
SNPsrs4938303
Merged0
SNP id current4938303
Contextintergenic_variant
Intergenic1
Allele frequency0.75
P value4E-21
Pvalue mlog20.397940008672
P value text
Or beta0.07
%95 Ci[0.06-0.08] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2155369] (imputed)
CNVN
Mapped traittriglyceride measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004530
Study accessionGCST000809